Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd28P31041 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cd28P31041 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cd28P31041 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Gm37856-201ENSMUST00000191634 999 ntBASIC14.09□□□□□ -0.15
Cd28P31041 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.09□□□□□ -0.15
Cd28P31041 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cd28P31041 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.09□□□□□ -0.15
Cd28P31041 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd28P31041 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cd28P31041 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cd28P31041 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cd28P31041 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cd28P31041 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cd28P31041 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cd28P31041 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cd28P31041 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cd28P31041 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Phf7-203ENSMUST00000226565 1971 ntBASIC14.08□□□□□ -0.16
Cd28P31041 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.08□□□□□ -0.16
Cd28P31041 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cd28P31041 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.08□□□□□ -0.16
Cd28P31041 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd28P31041 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cd28P31041 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.07□□□□□ -0.16
Cd28P31041 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cd28P31041 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Gm13186-201ENSMUST00000118031 316 ntBASIC14.07□□□□□ -0.16
Cd28P31041 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Gm10698-201ENSMUST00000182663 604 ntBASIC14.07□□□□□ -0.16
Cd28P31041 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.07□□□□□ -0.16
Cd28P31041 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cd28P31041 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.07□□□□□ -0.16
Cd28P31041 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.07□□□□□ -0.16
Cd28P31041 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cd28P31041 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cd28P31041 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd28P31041 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cd28P31041 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms