Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.54■■□□□ 1.04
CenpbP27790 Gm5075-201ENSMUST00000196916 622 ntBASIC21.54■■□□□ 1.04
CenpbP27790 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CenpbP27790 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.54■■□□□ 1.04
CenpbP27790 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CenpbP27790 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.54■■□□□ 1.04
CenpbP27790 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.54■■□□□ 1.04
CenpbP27790 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CenpbP27790 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CenpbP27790 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CenpbP27790 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CenpbP27790 Gm11960-202ENSMUST00000181063 2858 ntBASIC21.54■■□□□ 1.04
CenpbP27790 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CenpbP27790 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CenpbP27790 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CenpbP27790 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CenpbP27790 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CenpbP27790 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC21.53■■□□□ 1.04
CenpbP27790 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CenpbP27790 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC21.53■■□□□ 1.04
CenpbP27790 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.53■■□□□ 1.04
CenpbP27790 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CenpbP27790 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CenpbP27790 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CenpbP27790 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CenpbP27790 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.52■■□□□ 1.04
CenpbP27790 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CenpbP27790 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.52■■□□□ 1.04
CenpbP27790 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CenpbP27790 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CenpbP27790 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CenpbP27790 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
CenpbP27790 Gm9768-201ENSMUST00000206007 2861 ntBASIC21.52■■□□□ 1.04
CenpbP27790 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CenpbP27790 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CenpbP27790 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CenpbP27790 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CenpbP27790 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CenpbP27790 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CenpbP27790 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.51■■□□□ 1.03
CenpbP27790 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Gm45003-201ENSMUST00000205875 2158 ntBASIC21.51■■□□□ 1.03
CenpbP27790 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CenpbP27790 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CenpbP27790 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CenpbP27790 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC21.5■■□□□ 1.03
CenpbP27790 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC21.5■■□□□ 1.03
CenpbP27790 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.5■■□□□ 1.03
CenpbP27790 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CenpbP27790 Sorbs3-204ENSMUST00000227929 2460 ntBASIC21.5■■□□□ 1.03
CenpbP27790 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CenpbP27790 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC21.5■■□□□ 1.03
CenpbP27790 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CenpbP27790 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CenpbP27790 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms