Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccl6P27784 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl6P27784 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccl6P27784 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccl6P27784 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.46□□□□□ -0.42
Ccl6P27784 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.46□□□□□ -0.42
Ccl6P27784 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl6P27784 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccl6P27784 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Gm9013-201ENSMUST00000132939 882 ntBASIC12.45□□□□□ -0.42
Ccl6P27784 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccl6P27784 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Gm5587-201ENSMUST00000206270 674 ntBASIC12.45□□□□□ -0.42
Ccl6P27784 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccl6P27784 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Dancr-204ENSMUST00000132389 2347 ntBASIC12.45□□□□□ -0.42
Ccl6P27784 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Ccl6P27784 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Ccl6P27784 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl6P27784 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccl6P27784 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ccl6P27784 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccl6P27784 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 AA414768-201ENSMUST00000121924 1257 ntBASIC12.44□□□□□ -0.42
Ccl6P27784 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccl6P27784 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccl6P27784 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Gm36967-201ENSMUST00000193814 266 ntBASIC12.44□□□□□ -0.42
Ccl6P27784 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccl6P27784 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.44□□□□□ -0.42
Ccl6P27784 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccl6P27784 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.44□□□□□ -0.42
Ccl6P27784 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ccl6P27784 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl6P27784 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl6P27784 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl6P27784 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms