Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Pde6aP27664 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pde6aP27664 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6aP27664 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6aP27664 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.46■□□□□ 0.55
Pde6aP27664 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Pde6aP27664 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Pde6aP27664 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.46■□□□□ 0.55
Pde6aP27664 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.46■□□□□ 0.55
Pde6aP27664 Gm43347-201ENSMUST00000200226 580 ntBASIC18.46■□□□□ 0.55
Pde6aP27664 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pde6aP27664 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.46■□□□□ 0.55
Pde6aP27664 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6aP27664 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pde6aP27664 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pde6aP27664 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pde6aP27664 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.45■□□□□ 0.54
Pde6aP27664 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Pde6aP27664 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm8825-201ENSMUST00000182565 998 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm4518-201ENSMUST00000182638 718 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.45■□□□□ 0.54
Pde6aP27664 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pde6aP27664 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.45■□□□□ 0.54
Pde6aP27664 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.45■□□□□ 0.54
Pde6aP27664 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6aP27664 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Gm7153-201ENSMUST00000117092 455 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Pde6aP27664 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44357-201ENSMUST00000195897 142 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm19658-201ENSMUST00000196231 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44367-201ENSMUST00000196836 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44350-201ENSMUST00000197197 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44390-201ENSMUST00000197533 144 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44313-201ENSMUST00000198018 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44486-201ENSMUST00000198508 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44314-201ENSMUST00000199263 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44394-201ENSMUST00000199558 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44484-201ENSMUST00000199873 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44466-201ENSMUST00000200264 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Gm44359-201ENSMUST00000200671 138 ntBASIC18.44■□□□□ 0.54
Pde6aP27664 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Pde6aP27664 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.44■□□□□ 0.54
Pde6aP27664 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pde6aP27664 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pde6aP27664 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6aP27664 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pde6aP27664 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.43■□□□□ 0.54
Pde6aP27664 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Pde6aP27664 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Pde6aP27664 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms