Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.69□□□□□ -0.06
Cd40lgP27548 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.69□□□□□ -0.06
Cd40lgP27548 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.69□□□□□ -0.06
Cd40lgP27548 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd40lgP27548 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cd40lgP27548 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.68□□□□□ -0.06
Cd40lgP27548 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Cd40lgP27548 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.68□□□□□ -0.06
Cd40lgP27548 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Gm18669-201ENSMUST00000216049 778 ntBASIC14.68□□□□□ -0.06
Cd40lgP27548 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cd40lgP27548 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cd40lgP27548 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cd40lgP27548 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cd40lgP27548 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd40lgP27548 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd40lgP27548 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cd40lgP27548 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Cd40lgP27548 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40lgP27548 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd40lgP27548 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd40lgP27548 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cd40lgP27548 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cd40lgP27548 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.66□□□□□ -0.06
Cd40lgP27548 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cd40lgP27548 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40lgP27548 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.65□□□□□ -0.06
Cd40lgP27548 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms