Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.33■□□□□ 0.21
Nfkb1P25799 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nfkb1P25799 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.33■□□□□ 0.2
Nfkb1P25799 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.33■□□□□ 0.2
Nfkb1P25799 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nfkb1P25799 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.33■□□□□ 0.2
Nfkb1P25799 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nfkb1P25799 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nfkb1P25799 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.32■□□□□ 0.2
Nfkb1P25799 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.32■□□□□ 0.2
Nfkb1P25799 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.32■□□□□ 0.2
Nfkb1P25799 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nfkb1P25799 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.32■□□□□ 0.2
Nfkb1P25799 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Nfkb1P25799 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nfkb1P25799 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.31■□□□□ 0.2
Nfkb1P25799 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Gm6550-201ENSMUST00000187574 993 ntBASIC16.31■□□□□ 0.2
Nfkb1P25799 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.31■□□□□ 0.2
Nfkb1P25799 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Nfkb1P25799 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nfkb1P25799 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nfkb1P25799 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.3■□□□□ 0.2
Nfkb1P25799 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.3■□□□□ 0.2
Nfkb1P25799 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms