Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Irf8P23611 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Irf8P23611 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.18■□□□□ 0.34
Irf8P23611 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Irf8P23611 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Irf8P23611 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Irf8P23611 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.18■□□□□ 0.34
Irf8P23611 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Irf8P23611 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Irf8P23611 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.17■□□□□ 0.34
Irf8P23611 Gm7506-201ENSMUST00000207758 815 ntBASIC17.17■□□□□ 0.34
Irf8P23611 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.17■□□□□ 0.34
Irf8P23611 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Birc2-201ENSMUST00000054878 378 ntBASIC17.17■□□□□ 0.34
Irf8P23611 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Irf8P23611 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Irf8P23611 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.17■□□□□ 0.34
Irf8P23611 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.16■□□□□ 0.34
Irf8P23611 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Irf8P23611 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.16■□□□□ 0.34
Irf8P23611 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.16■□□□□ 0.34
Irf8P23611 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.16■□□□□ 0.34
Irf8P23611 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.16■□□□□ 0.34
Irf8P23611 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.16■□□□□ 0.34
Irf8P23611 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.16■□□□□ 0.34
Irf8P23611 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf8P23611 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Irf8P23611 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Irf8P23611 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Irf8P23611 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.15■□□□□ 0.34
Irf8P23611 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.15■□□□□ 0.34
Irf8P23611 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Irf8P23611 Gm34391-201ENSMUST00000203706 907 ntBASIC17.15■□□□□ 0.34
Irf8P23611 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf8P23611 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Irf8P23611 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Irf8P23611 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Irf8P23611 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.14■□□□□ 0.33
Irf8P23611 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Gm8655-201ENSMUST00000221159 852 ntBASIC17.14■□□□□ 0.33
Irf8P23611 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Irf8P23611 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf8P23611 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Irf8P23611 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms