Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sdc1P18828 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.14□□□□□ -0.31
Sdc1P18828 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.14□□□□□ -0.31
Sdc1P18828 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sdc1P18828 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.13□□□□□ -0.31
Sdc1P18828 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sdc1P18828 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.13□□□□□ -0.31
Sdc1P18828 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.13□□□□□ -0.31
Sdc1P18828 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.13□□□□□ -0.31
Sdc1P18828 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.13□□□□□ -0.31
Sdc1P18828 Gm4974-201ENSMUST00000209974 875 ntBASIC13.13□□□□□ -0.31
Sdc1P18828 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sdc1P18828 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sdc1P18828 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.13□□□□□ -0.31
Sdc1P18828 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sdc1P18828 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Sdc1P18828 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Gm15375-201ENSMUST00000119510 849 ntBASIC13.12□□□□□ -0.31
Sdc1P18828 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Sdc1P18828 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.12□□□□□ -0.31
Sdc1P18828 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sdc1P18828 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sdc1P18828 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sdc1P18828 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sdc1P18828 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.11□□□□□ -0.31
Sdc1P18828 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sdc1P18828 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.11□□□□□ -0.31
Sdc1P18828 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.11□□□□□ -0.31
Sdc1P18828 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Sdc1P18828 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.11□□□□□ -0.31
Sdc1P18828 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sdc1P18828 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sdc1P18828 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.1□□□□□ -0.31
Sdc1P18828 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sdc1P18828 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sdc1P18828 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sdc1P18828 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.1□□□□□ -0.31
Sdc1P18828 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sdc1P18828 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms