Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hmgn1P18608 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Gm13474-201ENSMUST00000122466 815 ntBASIC14.6□□□□□ -0.07
Hmgn1P18608 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Hmgn1P18608 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.6□□□□□ -0.07
Hmgn1P18608 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hmgn1P18608 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.59□□□□□ -0.07
Hmgn1P18608 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.59□□□□□ -0.07
Hmgn1P18608 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Hmgn1P18608 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgn1P18608 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Hmgn1P18608 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hmgn1P18608 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmgn1P18608 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Hmgn1P18608 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.58□□□□□ -0.07
Hmgn1P18608 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hmgn1P18608 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Hmgn1P18608 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.58□□□□□ -0.08
Hmgn1P18608 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgn1P18608 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgn1P18608 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgn1P18608 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgn1P18608 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Hmgn1P18608 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmgn1P18608 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Hmgn1P18608 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Hmgn1P18608 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgn1P18608 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgn1P18608 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmgn1P18608 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgn1P18608 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms