Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30aP15533 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim30aP15533 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim30aP15533 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30aP15533 Phf7-203ENSMUST00000226565 1971 ntBASIC17.59■□□□□ 0.41
Trim30aP15533 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim30aP15533 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.58■□□□□ 0.41
Trim30aP15533 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim30aP15533 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim30aP15533 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trim30aP15533 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim30aP15533 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim30aP15533 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim30aP15533 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30aP15533 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.58■□□□□ 0.4
Trim30aP15533 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Trim30aP15533 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim30aP15533 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim30aP15533 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim30aP15533 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim30aP15533 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.57■□□□□ 0.4
Trim30aP15533 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30aP15533 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim30aP15533 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim30aP15533 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim30aP15533 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim30aP15533 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim30aP15533 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.56■□□□□ 0.4
Trim30aP15533 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim30aP15533 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trim30aP15533 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim30aP15533 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30aP15533 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Trim30aP15533 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim30aP15533 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim30aP15533 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Gm21956-201ENSMUST00000179946 522 ntBASIC17.55■□□□□ 0.4
Trim30aP15533 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim30aP15533 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Gm13241-201ENSMUST00000094493 780 ntBASIC17.55■□□□□ 0.4
Trim30aP15533 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim30aP15533 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim30aP15533 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30aP15533 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim30aP15533 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim30aP15533 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim30aP15533 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim30aP15533 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Trim30aP15533 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Mtag2-201ENSMUST00000058665 714 ntBASIC17.54■□□□□ 0.4
Trim30aP15533 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim30aP15533 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30aP15533 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms