Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cntn1P12960 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cntn1P12960 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cntn1P12960 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cntn1P12960 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cntn1P12960 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.26■□□□□ 0.03
Cntn1P12960 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Gm7862-201ENSMUST00000121461 292 ntBASIC15.26■□□□□ 0.03
Cntn1P12960 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.26■□□□□ 0.03
Cntn1P12960 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.26■□□□□ 0.03
Cntn1P12960 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cntn1P12960 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.26■□□□□ 0.03
Cntn1P12960 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cntn1P12960 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cntn1P12960 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cntn1P12960 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cntn1P12960 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cntn1P12960 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.25■□□□□ 0.03
Cntn1P12960 Gm12497-201ENSMUST00000138778 237 ntBASIC15.25■□□□□ 0.03
Cntn1P12960 Gm18195-201ENSMUST00000207604 706 ntBASIC15.25■□□□□ 0.03
Cntn1P12960 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cntn1P12960 Gm9172-201ENSMUST00000212092 954 ntBASIC15.25■□□□□ 0.03
Cntn1P12960 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.25■□□□□ 0.03
Cntn1P12960 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cntn1P12960 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.24■□□□□ 0.03
Cntn1P12960 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.24■□□□□ 0.03
Cntn1P12960 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cntn1P12960 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cntn1P12960 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.24■□□□□ 0.03
Cntn1P12960 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cntn1P12960 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Dancr-204ENSMUST00000132389 2347 ntBASIC15.24■□□□□ 0.03
Cntn1P12960 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.24■□□□□ 0.03
Cntn1P12960 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cntn1P12960 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.23■□□□□ 0.03
Cntn1P12960 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cntn1P12960 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Gm8097-201ENSMUST00000117903 829 ntBASIC15.23■□□□□ 0.03
Cntn1P12960 Gm13418-201ENSMUST00000119097 944 ntBASIC15.23■□□□□ 0.03
Cntn1P12960 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.23■□□□□ 0.03
Cntn1P12960 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cntn1P12960 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.23■□□□□ 0.03
Cntn1P12960 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.23■□□□□ 0.03
Cntn1P12960 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Cntn1P12960 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.23■□□□□ 0.03
Cntn1P12960 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntn1P12960 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms