Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp6P0C0A3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chmp6P0C0A3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp6P0C0A3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp6P0C0A3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Gm9103-201ENSMUST00000119371 405 ntBASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp6P0C0A3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp6P0C0A3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp6P0C0A3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp6P0C0A3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms