Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h2P0C090 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h2P0C090 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.18■□□□□ 0.18
Rc3h2P0C090 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h2P0C090 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gm11779-201ENSMUST00000118541 368 ntBASIC16.17■□□□□ 0.18
Rc3h2P0C090 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h2P0C090 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gm13216-201ENSMUST00000117145 591 ntBASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.16■□□□□ 0.18
Rc3h2P0C090 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gm37935-201ENSMUST00000192012 982 ntBASIC16.16■□□□□ 0.18
Rc3h2P0C090 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.16■□□□□ 0.18
Rc3h2P0C090 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
Rc3h2P0C090 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.15■□□□□ 0.18
Rc3h2P0C090 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rc3h2P0C090 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.15■□□□□ 0.18
Rc3h2P0C090 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.15■□□□□ 0.18
Rc3h2P0C090 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h2P0C090 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms