Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Krt1P04104 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.12■□□□□ 0.01
Krt1P04104 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Krt1P04104 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.12■□□□□ 0.01
Krt1P04104 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Krt1P04104 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Krt1P04104 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Krt1P04104 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.12■□□□□ 0.01
Krt1P04104 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Krt1P04104 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Krt1P04104 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Krt1P04104 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.11■□□□□ 0.01
Krt1P04104 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Krt1P04104 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Krt1P04104 Gm18958-201ENSMUST00000174258 762 ntBASIC15.11■□□□□ 0.01
Krt1P04104 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Krt1P04104 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.11■□□□□ 0.01
Krt1P04104 Gm9731-201ENSMUST00000209480 747 ntBASIC15.11■□□□□ 0.01
Krt1P04104 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.11■□□□□ 0.01
Krt1P04104 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Krt1P04104 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.11■□□□□ 0.01
Krt1P04104 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Krt1P04104 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Krt1P04104 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.1■□□□□ 0.01
Krt1P04104 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Krt1P04104 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.1■□□□□ 0.01
Krt1P04104 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.1■□□□□ 0.01
Krt1P04104 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.1■□□□□ 0.01
Krt1P04104 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.1■□□□□ 0.01
Krt1P04104 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Krt1P04104 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Gm42545-201ENSMUST00000202755 922 ntBASIC15.1■□□□□ 0.01
Krt1P04104 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Krt1P04104 Actl10-202ENSMUST00000226583 1501 ntBASIC15.1■□□□□ 0.01
Krt1P04104 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Krt1P04104 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Krt1P04104 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Krt1P04104 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Krt1P04104 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms