Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ifnb1P01575 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ifnb1P01575 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Ifnb1P01575 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ifnb1P01575 App-207ENSMUST00000227737 2827 ntBASIC16.83■□□□□ 0.29
Ifnb1P01575 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ifnb1P01575 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ifnb1P01575 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Gm25016-201ENSMUST00000158399 131 ntBASIC16.83■□□□□ 0.28
Ifnb1P01575 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.83■□□□□ 0.28
Ifnb1P01575 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Ifnb1P01575 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Gm29518-201ENSMUST00000190858 372 ntBASIC16.83■□□□□ 0.28
Ifnb1P01575 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.83■□□□□ 0.28
Ifnb1P01575 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ifnb1P01575 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ifnb1P01575 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.82■□□□□ 0.28
Ifnb1P01575 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ifnb1P01575 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.82■□□□□ 0.28
Ifnb1P01575 Gm45328-201ENSMUST00000210942 917 ntBASIC16.82■□□□□ 0.28
Ifnb1P01575 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ifnb1P01575 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ifnb1P01575 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ifnb1P01575 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Gm13836-201ENSMUST00000121159 501 ntBASIC16.81■□□□□ 0.28
Ifnb1P01575 AA414768-201ENSMUST00000121924 1257 ntBASIC16.81■□□□□ 0.28
Ifnb1P01575 Gm6659-201ENSMUST00000174752 547 ntBASIC16.81■□□□□ 0.28
Ifnb1P01575 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Ifnb1P01575 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ifnb1P01575 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.81■□□□□ 0.28
Ifnb1P01575 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.81■□□□□ 0.28
Ifnb1P01575 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ifnb1P01575 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ifnb1P01575 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ifnb1P01575 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ifnb1P01575 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.8■□□□□ 0.28
Ifnb1P01575 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.8■□□□□ 0.28
Ifnb1P01575 Mir6404-201ENSMUST00000183699 94 ntBASIC16.8■□□□□ 0.28
Ifnb1P01575 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ifnb1P01575 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ifnb1P01575 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ifnb1P01575 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms