Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Gm44450-201ENSMUST00000199528 114 ntBASIC13.47□□□□□ -0.25
Ifna1P01572 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ifna1P01572 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ifna1P01572 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.46□□□□□ -0.25
Ifna1P01572 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ifna1P01572 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ifna1P01572 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Gm11539-201ENSMUST00000119837 557 ntBASIC13.46□□□□□ -0.25
Ifna1P01572 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.46□□□□□ -0.25
Ifna1P01572 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.46□□□□□ -0.25
Ifna1P01572 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Odf3b-204ENSMUST00000227834 930 ntBASIC13.46□□□□□ -0.25
Ifna1P01572 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ifna1P01572 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ifna1P01572 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ifna1P01572 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ifna1P01572 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ifna1P01572 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ifna1P01572 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ifna1P01572 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ifna1P01572 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.45□□□□□ -0.26
Ifna1P01572 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ifna1P01572 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.45□□□□□ -0.26
Ifna1P01572 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.45□□□□□ -0.26
Ifna1P01572 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.45□□□□□ -0.26
Ifna1P01572 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.45□□□□□ -0.26
Ifna1P01572 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ifna1P01572 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.45□□□□□ -0.26
Ifna1P01572 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Gm27463-201ENSMUST00000183569 57 ntBASIC13.45□□□□□ -0.26
Ifna1P01572 Gm18421-201ENSMUST00000204122 625 ntBASIC13.45□□□□□ -0.26
Ifna1P01572 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.45□□□□□ -0.26
Ifna1P01572 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.45□□□□□ -0.26
Ifna1P01572 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.45□□□□□ -0.26
Ifna1P01572 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ifna1P01572 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ifna1P01572 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ifna1P01572 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.44□□□□□ -0.26
Ifna1P01572 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ifna1P01572 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ifna1P01572 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ifna1P01572 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms