Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.69■□□□□ 0.9
Apaf1O88879 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.69■□□□□ 0.9
Apaf1O88879 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Apaf1O88879 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Gm25990-201ENSMUST00000102440 86 ntBASIC20.68■□□□□ 0.9
Apaf1O88879 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.68■□□□□ 0.9
Apaf1O88879 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.68■□□□□ 0.9
Apaf1O88879 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.68■□□□□ 0.9
Apaf1O88879 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apaf1O88879 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Apaf1O88879 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Apaf1O88879 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.67■□□□□ 0.9
Apaf1O88879 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.67■□□□□ 0.9
Apaf1O88879 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.67■□□□□ 0.9
Apaf1O88879 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.67■□□□□ 0.9
Apaf1O88879 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.67■□□□□ 0.9
Apaf1O88879 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.67■□□□□ 0.9
Apaf1O88879 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.67■□□□□ 0.9
Apaf1O88879 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Apaf1O88879 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apaf1O88879 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.66■□□□□ 0.9
Apaf1O88879 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Gm6257-201ENSMUST00000163864 910 ntBASIC20.66■□□□□ 0.9
Apaf1O88879 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Apaf1O88879 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.66■□□□□ 0.9
Apaf1O88879 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.66■□□□□ 0.9
Apaf1O88879 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.66■□□□□ 0.9
Apaf1O88879 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Apaf1O88879 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apaf1O88879 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.65■□□□□ 0.9
Apaf1O88879 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.65■□□□□ 0.9
Apaf1O88879 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.65■□□□□ 0.9
Apaf1O88879 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.65■□□□□ 0.9
Apaf1O88879 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Apaf1O88879 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apaf1O88879 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Apaf1O88879 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Apaf1O88879 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Apaf1O88879 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.64■□□□□ 0.9
Apaf1O88879 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Apaf1O88879 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Apaf1O88879 Gm6089-201ENSMUST00000197666 938 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms