Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.22□□□□□ -0.13
CcnkO88874 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CcnkO88874 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.21□□□□□ -0.13
CcnkO88874 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
CcnkO88874 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CcnkO88874 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CcnkO88874 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.21□□□□□ -0.13
CcnkO88874 Gm13836-201ENSMUST00000121159 501 ntBASIC14.21□□□□□ -0.13
CcnkO88874 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CcnkO88874 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CcnkO88874 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CcnkO88874 Gm5417-201ENSMUST00000079706 384 ntBASIC14.21□□□□□ -0.13
CcnkO88874 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CcnkO88874 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CcnkO88874 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CcnkO88874 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CcnkO88874 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CcnkO88874 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CcnkO88874 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CcnkO88874 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CcnkO88874 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CcnkO88874 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.2□□□□□ -0.14
CcnkO88874 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CcnkO88874 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.2□□□□□ -0.14
CcnkO88874 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.2□□□□□ -0.14
CcnkO88874 Gm18958-201ENSMUST00000174258 762 ntBASIC14.2□□□□□ -0.14
CcnkO88874 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CcnkO88874 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.2□□□□□ -0.14
CcnkO88874 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.2□□□□□ -0.14
CcnkO88874 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CcnkO88874 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CcnkO88874 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CcnkO88874 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CcnkO88874 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CcnkO88874 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CcnkO88874 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CcnkO88874 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CcnkO88874 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CcnkO88874 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.19□□□□□ -0.14
CcnkO88874 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.19□□□□□ -0.14
CcnkO88874 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CcnkO88874 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.19□□□□□ -0.14
CcnkO88874 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CcnkO88874 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CcnkO88874 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CcnkO88874 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.19□□□□□ -0.14
CcnkO88874 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CcnkO88874 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CcnkO88874 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.18□□□□□ -0.14
CcnkO88874 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CcnkO88874 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.18□□□□□ -0.14
CcnkO88874 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.18□□□□□ -0.14
CcnkO88874 Gm37055-201ENSMUST00000191866 133 ntBASIC14.18□□□□□ -0.14
CcnkO88874 Gm30025-201ENSMUST00000218555 728 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms