Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Gm5417-201ENSMUST00000079706 384 ntBASIC15.3■□□□□ 0.04
Hcn3O88705 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.3■□□□□ 0.04
Hcn3O88705 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcn3O88705 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcn3O88705 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hcn3O88705 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Hcn3O88705 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcn3O88705 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hcn3O88705 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.29■□□□□ 0.04
Hcn3O88705 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcn3O88705 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcn3O88705 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.28■□□□□ 0.04
Hcn3O88705 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.28■□□□□ 0.04
Hcn3O88705 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hcn3O88705 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hcn3O88705 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hcn3O88705 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcn3O88705 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.28■□□□□ 0.04
Hcn3O88705 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.27■□□□□ 0.04
Hcn3O88705 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hcn3O88705 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.27■□□□□ 0.04
Hcn3O88705 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hcn3O88705 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Hcn3O88705 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.27■□□□□ 0.04
Hcn3O88705 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.27■□□□□ 0.04
Hcn3O88705 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcn3O88705 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn3O88705 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn3O88705 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn3O88705 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.26■□□□□ 0.03
Hcn3O88705 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Hcn3O88705 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.26■□□□□ 0.03
Hcn3O88705 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Hcn3O88705 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hcn3O88705 Mir6982-201ENSMUST00000184354 68 ntBASIC15.26■□□□□ 0.03
Hcn3O88705 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hcn3O88705 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms