Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sema3fO88632 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sema3fO88632 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sema3fO88632 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sema3fO88632 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sema3fO88632 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sema3fO88632 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.33■□□□□ 0.52
Sema3fO88632 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sema3fO88632 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.33■□□□□ 0.52
Sema3fO88632 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.33■□□□□ 0.52
Sema3fO88632 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Sema3fO88632 Gm8000-201ENSMUST00000188378 592 ntBASIC18.33■□□□□ 0.52
Sema3fO88632 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.33■□□□□ 0.52
Sema3fO88632 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.33■□□□□ 0.52
Sema3fO88632 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.33■□□□□ 0.52
Sema3fO88632 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.33■□□□□ 0.52
Sema3fO88632 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sema3fO88632 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.33■□□□□ 0.52
Sema3fO88632 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.33■□□□□ 0.52
Sema3fO88632 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.33■□□□□ 0.52
Sema3fO88632 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sema3fO88632 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sema3fO88632 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.32■□□□□ 0.52
Sema3fO88632 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.32■□□□□ 0.52
Sema3fO88632 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.32■□□□□ 0.52
Sema3fO88632 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sema3fO88632 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sema3fO88632 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.32■□□□□ 0.52
Sema3fO88632 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.32■□□□□ 0.52
Sema3fO88632 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sema3fO88632 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.31■□□□□ 0.52
Sema3fO88632 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Gm4995-201ENSMUST00000117247 432 ntBASIC18.31■□□□□ 0.52
Sema3fO88632 Gm14140-201ENSMUST00000119999 995 ntBASIC18.31■□□□□ 0.52
Sema3fO88632 Gm11594-201ENSMUST00000122313 162 ntBASIC18.31■□□□□ 0.52
Sema3fO88632 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sema3fO88632 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3fO88632 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3fO88632 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Sema3fO88632 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms