Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cops4O88544 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.74□□□□□ -0.05
Cops4O88544 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cops4O88544 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.74□□□□□ -0.05
Cops4O88544 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Il3ra-202ENSMUST00000223589 738 ntBASIC14.74□□□□□ -0.05
Cops4O88544 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.74□□□□□ -0.05
Cops4O88544 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cops4O88544 Gm10812-201ENSMUST00000099864 546 ntBASIC14.74□□□□□ -0.05
Cops4O88544 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.74□□□□□ -0.05
Cops4O88544 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.74□□□□□ -0.05
Cops4O88544 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cops4O88544 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Cops4O88544 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Cops4O88544 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cops4O88544 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cops4O88544 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cops4O88544 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.73□□□□□ -0.05
Cops4O88544 Gm715-201ENSMUST00000117865 831 ntBASIC14.73□□□□□ -0.05
Cops4O88544 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.73□□□□□ -0.05
Cops4O88544 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.73□□□□□ -0.05
Cops4O88544 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cops4O88544 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Cops4O88544 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cops4O88544 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.73□□□□□ -0.05
Cops4O88544 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cops4O88544 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.72□□□□□ -0.05
Cops4O88544 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.72□□□□□ -0.05
Cops4O88544 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.72□□□□□ -0.05
Cops4O88544 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cops4O88544 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.72□□□□□ -0.05
Cops4O88544 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cops4O88544 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cops4O88544 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.72□□□□□ -0.05
Cops4O88544 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cops4O88544 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cops4O88544 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.72□□□□□ -0.05
Cops4O88544 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cops4O88544 Actl10-202ENSMUST00000226583 1501 ntBASIC14.71□□□□□ -0.05
Cops4O88544 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cops4O88544 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.71□□□□□ -0.05
Cops4O88544 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cops4O88544 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.71□□□□□ -0.05
Cops4O88544 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms