Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Auts2-212ENSMUST00000178555 309 ntBASIC15.11■□□□□ 0.01
Tgfbr3O88393 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.11■□□□□ 0.01
Tgfbr3O88393 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.11■□□□□ 0.01
Tgfbr3O88393 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tgfbr3O88393 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tgfbr3O88393 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm15358-201ENSMUST00000119249 520 ntBASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm17271-201ENSMUST00000165535 355 ntBASIC15.09■□□□□ 0.01
Tgfbr3O88393 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.09■□□□□ 0.01
Tgfbr3O88393 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Tgfbr3O88393 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.08■□□□□ 0.01
Tgfbr3O88393 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tgfbr3O88393 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tgfbr3O88393 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.08■□□□□ 0
Tgfbr3O88393 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Tgfbr3O88393 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tgfbr3O88393 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.08■□□□□ 0
Tgfbr3O88393 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.08■□□□□ 0
Tgfbr3O88393 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tgfbr3O88393 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.08■□□□□ 0
Tgfbr3O88393 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms