Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col5a1O88207 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.27□□□□□ -0.13
Col5a1O88207 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.27□□□□□ -0.13
Col5a1O88207 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Gm15427-201ENSMUST00000117288 531 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col5a1O88207 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Col5a1O88207 Gm4899-201ENSMUST00000178708 719 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Gm43474-201ENSMUST00000196415 774 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col5a1O88207 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Gm19164-201ENSMUST00000210667 640 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col5a1O88207 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.27□□□□□ -0.13
Col5a1O88207 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a1O88207 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col5a1O88207 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col5a1O88207 Gm15358-201ENSMUST00000119249 520 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Gm13365-201ENSMUST00000121188 973 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.26□□□□□ -0.13
Col5a1O88207 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Gm5866-201ENSMUST00000177881 973 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Mir6977-201ENSMUST00000184960 64 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Gm45167-201ENSMUST00000208007 322 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.26□□□□□ -0.13
Col5a1O88207 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a1O88207 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Col5a1O88207 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.26□□□□□ -0.13
Col5a1O88207 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a1O88207 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a1O88207 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.25□□□□□ -0.13
Col5a1O88207 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Col5a1O88207 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col5a1O88207 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.25□□□□□ -0.13
Col5a1O88207 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a1O88207 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a1O88207 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col5a1O88207 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.25□□□□□ -0.13
Col5a1O88207 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.25□□□□□ -0.13
Col5a1O88207 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a1O88207 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a1O88207 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms