Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Sybu-209ENSMUST00000228639 4113 ntBASIC14.48□□□□□ -0.09
Pdlim3O70209 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim3O70209 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.48□□□□□ -0.09
Pdlim3O70209 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.47□□□□□ -0.09
Pdlim3O70209 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdlim3O70209 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.47□□□□□ -0.09
Pdlim3O70209 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim3O70209 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim3O70209 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
Pdlim3O70209 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim3O70209 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim3O70209 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim3O70209 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim3O70209 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Pdlim3O70209 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim3O70209 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim3O70209 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pdlim3O70209 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim3O70209 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdlim3O70209 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.45□□□□□ -0.1
Pdlim3O70209 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.45□□□□□ -0.1
Pdlim3O70209 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.45□□□□□ -0.1
Pdlim3O70209 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim3O70209 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim3O70209 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim3O70209 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim3O70209 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim3O70209 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdlim3O70209 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim3O70209 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms