Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rdh5O55240 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rdh5O55240 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh5O55240 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Rdh5O55240 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rdh5O55240 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rdh5O55240 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rdh5O55240 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Rdh5O55240 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Rdh5O55240 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.1■□□□□ 0.01
Rdh5O55240 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.1■□□□□ 0.01
Rdh5O55240 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.1■□□□□ 0.01
Rdh5O55240 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh5O55240 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.09■□□□□ 0.01
Rdh5O55240 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.09■□□□□ 0.01
Rdh5O55240 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rdh5O55240 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rdh5O55240 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh5O55240 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rdh5O55240 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.08■□□□□ 0.01
Rdh5O55240 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh5O55240 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh5O55240 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh5O55240 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.08■□□□□ 0.01
Rdh5O55240 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh5O55240 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rdh5O55240 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rdh5O55240 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rdh5O55240 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.08■□□□□ 0
Rdh5O55240 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.08■□□□□ 0
Rdh5O55240 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.08■□□□□ 0
Rdh5O55240 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh5O55240 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rdh5O55240 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms