Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cxcl13O55038 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cxcl13O55038 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.43□□□□□ -0.26
Cxcl13O55038 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Gm27628-201ENSMUST00000184911 107 ntBASIC13.43□□□□□ -0.26
Cxcl13O55038 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.43□□□□□ -0.26
Cxcl13O55038 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.43□□□□□ -0.26
Cxcl13O55038 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.43□□□□□ -0.26
Cxcl13O55038 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.43□□□□□ -0.26
Cxcl13O55038 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Cxcl13O55038 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cxcl13O55038 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cxcl13O55038 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cxcl13O55038 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Gm8000-201ENSMUST00000188378 592 ntBASIC13.42□□□□□ -0.26
Cxcl13O55038 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.42□□□□□ -0.26
Cxcl13O55038 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.42□□□□□ -0.26
Cxcl13O55038 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cxcl13O55038 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms