Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.32■□□□□ 0.04
Cacna1bO55017 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Gm8825-201ENSMUST00000182565 998 ntBASIC15.32■□□□□ 0.04
Cacna1bO55017 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Cacna1bO55017 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Gm15358-201ENSMUST00000119249 520 ntBASIC15.32■□□□□ 0.04
Cacna1bO55017 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Gm18622-201ENSMUST00000219361 595 ntBASIC15.32■□□□□ 0.04
Cacna1bO55017 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cacna1bO55017 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm15427-201ENSMUST00000117288 531 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1bO55017 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm4518-201ENSMUST00000182638 718 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.31■□□□□ 0.04
Cacna1bO55017 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cacna1bO55017 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.3■□□□□ 0.04
Cacna1bO55017 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Mir449b-201ENSMUST00000104833 80 ntBASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.3■□□□□ 0.04
Cacna1bO55017 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.3■□□□□ 0.04
Cacna1bO55017 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.3■□□□□ 0.04
Cacna1bO55017 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cacna1bO55017 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1bO55017 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1bO55017 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1bO55017 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1bO55017 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cacna1bO55017 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1bO55017 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1bO55017 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cacna1bO55017 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms