Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.52■□□□□ 0.23
Cldn5O54942 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.51■□□□□ 0.23
Cldn5O54942 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.51■□□□□ 0.23
Cldn5O54942 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.51■□□□□ 0.23
Cldn5O54942 Gm6089-201ENSMUST00000197666 938 ntBASIC16.51■□□□□ 0.23
Cldn5O54942 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.51■□□□□ 0.23
Cldn5O54942 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cldn5O54942 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
Cldn5O54942 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cldn5O54942 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn5O54942 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cldn5O54942 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cldn5O54942 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.5■□□□□ 0.23
Cldn5O54942 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn5O54942 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cldn5O54942 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cldn5O54942 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Cldn5O54942 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.5■□□□□ 0.23
Cldn5O54942 AW822252-206ENSMUST00000208904 237 ntBASIC16.5■□□□□ 0.23
Cldn5O54942 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cldn5O54942 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cldn5O54942 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.5■□□□□ 0.23
Cldn5O54942 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn5O54942 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cldn5O54942 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cldn5O54942 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.49■□□□□ 0.23
Cldn5O54942 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn5O54942 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.49■□□□□ 0.23
Cldn5O54942 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn5O54942 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm7230-201ENSMUST00000173026 815 ntBASIC16.49■□□□□ 0.23
Cldn5O54942 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.49■□□□□ 0.23
Cldn5O54942 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.49■□□□□ 0.23
Cldn5O54942 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn5O54942 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cldn5O54942 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn5O54942 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.49■□□□□ 0.23
Cldn5O54942 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn5O54942 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cldn5O54942 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cldn5O54942 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms