Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ChkaO54804 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ChkaO54804 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.12■□□□□ 0.17
ChkaO54804 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.12■□□□□ 0.17
ChkaO54804 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ChkaO54804 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ChkaO54804 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ChkaO54804 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ChkaO54804 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ChkaO54804 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.11■□□□□ 0.17
ChkaO54804 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
ChkaO54804 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ChkaO54804 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.11■□□□□ 0.17
ChkaO54804 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.11■□□□□ 0.17
ChkaO54804 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ChkaO54804 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.11■□□□□ 0.17
ChkaO54804 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ChkaO54804 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ChkaO54804 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.1■□□□□ 0.17
ChkaO54804 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.1■□□□□ 0.17
ChkaO54804 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.1■□□□□ 0.17
ChkaO54804 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ChkaO54804 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ChkaO54804 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.1■□□□□ 0.17
ChkaO54804 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ChkaO54804 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ChkaO54804 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ChkaO54804 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ChkaO54804 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.09■□□□□ 0.17
ChkaO54804 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
ChkaO54804 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.09■□□□□ 0.17
ChkaO54804 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.09■□□□□ 0.17
ChkaO54804 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ChkaO54804 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.09■□□□□ 0.17
ChkaO54804 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms