Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cx3cl1O35188 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.97□□□□□ -0.01
Cx3cl1O35188 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cx3cl1O35188 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.96□□□□□ -0.01
Cx3cl1O35188 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.96□□□□□ -0.01
Cx3cl1O35188 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cx3cl1O35188 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cx3cl1O35188 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cx3cl1O35188 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cx3cl1O35188 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cx3cl1O35188 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cx3cl1O35188 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cx3cl1O35188 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cx3cl1O35188 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.95□□□□□ -0.02
Cx3cl1O35188 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cx3cl1O35188 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cl1O35188 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cl1O35188 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cx3cl1O35188 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms