Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hdac1O09106 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Hdac1O09106 Mir6404-201ENSMUST00000183699 94 ntBASIC18.98■□□□□ 0.63
Hdac1O09106 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hdac1O09106 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hdac1O09106 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac1O09106 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.97■□□□□ 0.63
Hdac1O09106 Gm10052-201ENSMUST00000168019 960 ntBASIC18.97■□□□□ 0.63
Hdac1O09106 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Hdac1O09106 Gm7729-201ENSMUST00000050143 801 ntBASIC18.97■□□□□ 0.63
Hdac1O09106 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.97■□□□□ 0.63
Hdac1O09106 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac1O09106 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Hdac1O09106 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.96■□□□□ 0.63
Hdac1O09106 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hdac1O09106 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac1O09106 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac1O09106 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac1O09106 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hdac1O09106 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac1O09106 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac1O09106 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac1O09106 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac1O09106 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hdac1O09106 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac1O09106 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac1O09106 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac1O09106 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hdac1O09106 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.95■□□□□ 0.62
Hdac1O09106 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.95■□□□□ 0.62
Hdac1O09106 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.95■□□□□ 0.62
Hdac1O09106 Gm7889-201ENSMUST00000185591 958 ntBASIC18.95■□□□□ 0.62
Hdac1O09106 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac1O09106 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Hdac1O09106 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hdac1O09106 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Hdac1O09106 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.94■□□□□ 0.62
Hdac1O09106 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.94■□□□□ 0.62
Hdac1O09106 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Hdac1O09106 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hdac1O09106 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Hdac1O09106 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac1O09106 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Hdac1O09106 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.93■□□□□ 0.62
Hdac1O09106 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms