Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ClockO08785 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.18■□□□□ 0.02
ClockO08785 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.18■□□□□ 0.02
ClockO08785 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.18■□□□□ 0.02
ClockO08785 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.18■□□□□ 0.02
ClockO08785 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ClockO08785 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClockO08785 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.17■□□□□ 0.02
ClockO08785 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.17■□□□□ 0.02
ClockO08785 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.17■□□□□ 0.02
ClockO08785 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ClockO08785 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClockO08785 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.16■□□□□ 0.02
ClockO08785 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ClockO08785 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.16■□□□□ 0.02
ClockO08785 Gm5643-201ENSMUST00000117081 966 ntBASIC15.16■□□□□ 0.02
ClockO08785 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.16■□□□□ 0.02
ClockO08785 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.16■□□□□ 0.02
ClockO08785 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.16■□□□□ 0.02
ClockO08785 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ClockO08785 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClockO08785 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.15■□□□□ 0.02
ClockO08785 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.15■□□□□ 0.02
ClockO08785 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ClockO08785 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ClockO08785 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
ClockO08785 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ClockO08785 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Gm12085-201ENSMUST00000119263 940 ntBASIC15.15■□□□□ 0.02
ClockO08785 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.15■□□□□ 0.02
ClockO08785 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
ClockO08785 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ClockO08785 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClockO08785 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms