Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp35M0QWN7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.07■□□□□ 0.32
Usp35M0QWN7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp35M0QWN7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp35M0QWN7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.06■□□□□ 0.32
Usp35M0QWN7 Gm15165-201ENSMUST00000118140 502 ntBASIC17.06■□□□□ 0.32
Usp35M0QWN7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Gm18733-201ENSMUST00000173950 856 ntBASIC17.06■□□□□ 0.32
Usp35M0QWN7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Gm44454-201ENSMUST00000198541 138 ntBASIC17.06■□□□□ 0.32
Usp35M0QWN7 Rps4l-201ENSMUST00000071745 943 ntBASIC17.06■□□□□ 0.32
Usp35M0QWN7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp35M0QWN7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp35M0QWN7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.05■□□□□ 0.32
Usp35M0QWN7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp35M0QWN7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.04■□□□□ 0.32
Usp35M0QWN7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Gm27867-201ENSMUST00000184778 125 ntBASIC17.04■□□□□ 0.32
Usp35M0QWN7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms