Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Timm23-208ENSMUST00000226683 750 ntBASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shisa8J3QNX5 BC037039-201ENSMUST00000192003 2205 ntBASIC14.56□□□□□ -0.08
Shisa8J3QNX5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gm36967-201ENSMUST00000193814 266 ntBASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gm18421-201ENSMUST00000204122 625 ntBASIC14.55□□□□□ -0.08
Shisa8J3QNX5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Shisa8J3QNX5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Gm18115-201ENSMUST00000221209 621 ntBASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shisa8J3QNX5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms