Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Gm13418-201ENSMUST00000119097 944 ntBASIC15.86■□□□□ 0.13
Gm3139J3QK78 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm3139J3QK78 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Gm25990-201ENSMUST00000102440 86 ntBASIC15.85■□□□□ 0.13
Gm3139J3QK78 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.85■□□□□ 0.13
Gm3139J3QK78 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.85■□□□□ 0.13
Gm3139J3QK78 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.85■□□□□ 0.13
Gm3139J3QK78 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm3139J3QK78 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Gm11780-201ENSMUST00000136880 516 ntBASIC15.84■□□□□ 0.13
Gm3139J3QK78 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm3139J3QK78 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm3139J3QK78 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.83■□□□□ 0.13
Gm3139J3QK78 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm3139J3QK78 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Gm18733-201ENSMUST00000173950 856 ntBASIC15.83■□□□□ 0.12
Gm3139J3QK78 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.83■□□□□ 0.12
Gm3139J3QK78 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Gm10060-201ENSMUST00000212002 111 ntBASIC15.83■□□□□ 0.12
Gm3139J3QK78 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.83■□□□□ 0.12
Gm3139J3QK78 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm3139J3QK78 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3139J3QK78 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.82■□□□□ 0.12
Gm3139J3QK78 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3139J3QK78 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.82■□□□□ 0.12
Gm3139J3QK78 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm3139J3QK78 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms