Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Mir1895-201ENSMUST00000122615 79 ntBASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Gm43125-201ENSMUST00000201724 730 ntBASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcf11G3X9Z4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Gm10499-201ENSMUST00000174094 934 ntBASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Rpph1-201ENSMUST00000175096 319 ntBASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Mir7036b-201ENSMUST00000184791 63 ntBASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Gm7292-201ENSMUST00000194706 2527 ntBASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Gm29361-201ENSMUST00000183323 2000 ntBASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcf11G3X9Z4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcf11G3X9Z4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC23.93■■□□□ 1.42
Pcf11G3X9Z4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC23.93■■□□□ 1.42
Pcf11G3X9Z4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcf11G3X9Z4 Gm27301-201ENSMUST00000184012 127 ntBASIC23.93■■□□□ 1.42
Pcf11G3X9Z4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Pcf11G3X9Z4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Gm44335-201ENSMUST00000196879 141 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Gm44297-201ENSMUST00000198304 141 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Gm44346-201ENSMUST00000198851 141 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pcf11G3X9Z4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm6226-201ENSMUST00000117765 1146 ntBASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm20553-201ENSMUST00000204205 844 ntBASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm11453-201ENSMUST00000117318 1007 ntBASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm10576-201ENSMUST00000191927 825 ntBASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC23.91■■□□□ 1.42
Pcf11G3X9Z4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Nrn1-204ENSMUST00000224323 1779 ntBASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Gm13616-201ENSMUST00000120600 222 ntBASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcf11G3X9Z4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcf11G3X9Z4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcf11G3X9Z4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcf11G3X9Z4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcf11G3X9Z4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms