Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sh3tc1G3X9F6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Gm8396-201ENSMUST00000057361 823 ntBASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.21■□□□□ 0.67
Sh3tc1G3X9F6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Mir1895-201ENSMUST00000122615 79 ntBASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc1G3X9F6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Gm27494-201ENSMUST00000184735 189 ntBASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Sh3tc1G3X9F6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sh3tc1G3X9F6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc1G3X9F6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms