Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc188F6WEU2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm12008-201ENSMUST00000117791 755 ntBASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm15321-201ENSMUST00000121290 288 ntBASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm8515-201ENSMUST00000194852 576 ntBASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm9908-201ENSMUST00000211534 448 ntBASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc188F6WEU2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Gm27838-201ENSMUST00000184829 128 ntBASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc188F6WEU2 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ccdc188F6WEU2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Gm15824-201ENSMUST00000119516 955 ntBASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc188F6WEU2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Gm6973-201ENSMUST00000117080 721 ntBASIC16■□□□□ 0.15
Ccdc188F6WEU2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16■□□□□ 0.15
Ccdc188F6WEU2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16■□□□□ 0.15
Ccdc188F6WEU2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc188F6WEU2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc188F6WEU2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc188F6WEU2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc188F6WEU2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc188F6WEU2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc188F6WEU2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc188F6WEU2 Gm12091-201ENSMUST00000146791 830 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms