Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6F6VAN0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Prob1-201ENSMUST00000097619 3021 ntBASIC16.38■□□□□ 0.21
Atf6F6VAN0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Gm15794-201ENSMUST00000120182 631 ntBASIC16.38■□□□□ 0.21
Atf6F6VAN0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6F6VAN0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.37■□□□□ 0.21
Atf6F6VAN0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.37■□□□□ 0.21
Atf6F6VAN0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6F6VAN0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atf6F6VAN0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6F6VAN0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.34■□□□□ 0.21
Atf6F6VAN0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.34■□□□□ 0.21
Atf6F6VAN0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms