Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc149F6V035 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ccdc149F6V035 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ccdc149F6V035 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Gm8344-201ENSMUST00000119813 856 ntBASIC16.14■□□□□ 0.17
Ccdc149F6V035 Gm14140-201ENSMUST00000119999 995 ntBASIC16.14■□□□□ 0.17
Ccdc149F6V035 Gm15467-201ENSMUST00000120582 445 ntBASIC16.14■□□□□ 0.17
Ccdc149F6V035 Gm27628-201ENSMUST00000184911 107 ntBASIC16.14■□□□□ 0.17
Ccdc149F6V035 Gm2213-201ENSMUST00000197485 688 ntBASIC16.14■□□□□ 0.17
Ccdc149F6V035 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.14■□□□□ 0.17
Ccdc149F6V035 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc149F6V035 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Gm5264-201ENSMUST00000190584 848 ntBASIC16.13■□□□□ 0.17
Ccdc149F6V035 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc149F6V035 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Gm11779-201ENSMUST00000118541 368 ntBASIC16.12■□□□□ 0.17
Ccdc149F6V035 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Gm27646-201ENSMUST00000183989 110 ntBASIC16.12■□□□□ 0.17
Ccdc149F6V035 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.12■□□□□ 0.17
Ccdc149F6V035 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc149F6V035 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc149F6V035 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Gm13216-201ENSMUST00000117145 591 ntBASIC16.11■□□□□ 0.17
Ccdc149F6V035 Gm11764-201ENSMUST00000120221 623 ntBASIC16.11■□□□□ 0.17
Ccdc149F6V035 Gm12260-201ENSMUST00000122447 411 ntBASIC16.11■□□□□ 0.17
Ccdc149F6V035 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.11■□□□□ 0.17
Ccdc149F6V035 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.11■□□□□ 0.17
Ccdc149F6V035 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc149F6V035 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms