Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Srp54bE9PXC0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Srp54bE9PXC0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm11779-201ENSMUST00000118541 368 ntBASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm11594-201ENSMUST00000122313 162 ntBASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm27628-201ENSMUST00000184911 107 ntBASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm5264-201ENSMUST00000190584 848 ntBASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Srp54bE9PXC0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Srp54bE9PXC0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Srp54bE9PXC0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Gm15467-201ENSMUST00000120582 445 ntBASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Srp54bE9PXC0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srp54bE9PXC0 Gm12260-201ENSMUST00000122447 411 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms