Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.01□□□□□ -0.17
Dchs1E9PVD3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14□□□□□ -0.17
Dchs1E9PVD3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Fgf17-202ENSMUST00000227123 1336 ntBASIC14□□□□□ -0.17
Dchs1E9PVD3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Dchs1E9PVD3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Mir449b-201ENSMUST00000104833 80 ntBASIC14□□□□□ -0.17
Dchs1E9PVD3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14□□□□□ -0.17
Dchs1E9PVD3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Dchs1E9PVD3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dchs1E9PVD3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Gm43474-201ENSMUST00000196415 774 ntBASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dchs1E9PVD3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dchs1E9PVD3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Dchs1E9PVD3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms