Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Syce3B5KM66 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.3■□□□□ 0.52
Syce3B5KM66 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.3■□□□□ 0.52
Syce3B5KM66 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Syce3B5KM66 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Syce3B5KM66 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syce3B5KM66 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Gm37856-201ENSMUST00000191634 999 ntBASIC18.29■□□□□ 0.52
Syce3B5KM66 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Syce3B5KM66 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syce3B5KM66 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Syce3B5KM66 Gm15378-201ENSMUST00000121894 207 ntBASIC18.28■□□□□ 0.52
Syce3B5KM66 Trmt13-210ENSMUST00000198454 880 ntBASIC18.28■□□□□ 0.52
Syce3B5KM66 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syce3B5KM66 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Syce3B5KM66 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Syce3B5KM66 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.27■□□□□ 0.52
Syce3B5KM66 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Gm44450-201ENSMUST00000199528 114 ntBASIC18.27■□□□□ 0.52
Syce3B5KM66 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Syce3B5KM66 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Syce3B5KM66 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Syce3B5KM66 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syce3B5KM66 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Syce3B5KM66 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Syce3B5KM66 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Syce3B5KM66 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Syce3B5KM66 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.26■□□□□ 0.51
Syce3B5KM66 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Gm18115-201ENSMUST00000221209 621 ntBASIC18.26■□□□□ 0.51
Syce3B5KM66 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms