Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Gm14701-201ENSMUST00000117156 348 ntBASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Gm13597-201ENSMUST00000121239 375 ntBASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Gm17968-201ENSMUST00000194902 784 ntBASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Gm44492-201ENSMUST00000197012 141 ntBASIC18.41■□□□□ 0.54
Clrn2B2RVW2 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clrn2B2RVW2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Gm9682-201ENSMUST00000197505 556 ntBASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clrn2B2RVW2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clrn2B2RVW2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clrn2B2RVW2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clrn2B2RVW2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Gm7787-201ENSMUST00000216858 688 ntBASIC18.38■□□□□ 0.53
Clrn2B2RVW2 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.38■□□□□ 0.53
Clrn2B2RVW2 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clrn2B2RVW2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clrn2B2RVW2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms