Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm12887B1AVM1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Gm12085-201ENSMUST00000119263 940 ntBASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm12887B1AVM1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gm12887B1AVM1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms