Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a6B1AVK5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Gm23547-201ENSMUST00000158210 271 ntBASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Gm10253-201ENSMUST00000194270 940 ntBASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a6B1AVK5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a6B1AVK5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a6B1AVK5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms