Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gm12742-201ENSMUST00000117326 410 ntBASIC12.87□□□□□ -0.35
Chd6A3KFM7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gm18622-201ENSMUST00000219361 595 ntBASIC12.87□□□□□ -0.35
Chd6A3KFM7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.87□□□□□ -0.35
Chd6A3KFM7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.86□□□□□ -0.35
Chd6A3KFM7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.86□□□□□ -0.35
Chd6A3KFM7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Gm6415-201ENSMUST00000118488 348 ntBASIC12.86□□□□□ -0.35
Chd6A3KFM7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.86□□□□□ -0.35
Chd6A3KFM7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.86□□□□□ -0.35
Chd6A3KFM7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.86□□□□□ -0.35
Chd6A3KFM7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd6A3KFM7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.85□□□□□ -0.35
Chd6A3KFM7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.85□□□□□ -0.35
Chd6A3KFM7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.85□□□□□ -0.35
Chd6A3KFM7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Gm8410-201ENSMUST00000117225 605 ntBASIC12.85□□□□□ -0.35
Chd6A3KFM7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd6A3KFM7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Gm18766-201ENSMUST00000189811 808 ntBASIC12.84□□□□□ -0.35
Chd6A3KFM7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd6A3KFM7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Chd6A3KFM7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.83□□□□□ -0.35
Chd6A3KFM7 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.83□□□□□ -0.35
Chd6A3KFM7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd6A3KFM7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms