Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Gm27533-201ENSMUST00000183800 152 ntBASIC24.93■■□□□ 1.58
Shroom2A2ALU4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Gm37194-201ENSMUST00000193092 3031 ntBASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom2A2ALU4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Asic1-205ENSMUST00000228185 1818 ntBASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom2A2ALU4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm11425-201ENSMUST00000119608 498 ntBASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm9396-201ENSMUST00000076703 567 ntBASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm6263-201ENSMUST00000120029 1342 ntBASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm5953-201ENSMUST00000220644 2616 ntBASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom2A2ALU4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Gm37519-201ENSMUST00000191687 2210 ntBASIC24.9■■□□□ 1.58
Shroom2A2ALU4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Gm15823-201ENSMUST00000064305 670 ntBASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom2A2ALU4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Gm9200-201ENSMUST00000118513 1354 ntBASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC24.89■■□□□ 1.57
Shroom2A2ALU4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Gm10154-201ENSMUST00000084445 354 ntBASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.57
Shroom2A2ALU4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Gm8116-201ENSMUST00000182917 1201 ntBASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
Shroom2A2ALU4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom2A2ALU4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom2A2ALU4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom2A2ALU4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom2A2ALU4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom2A2ALU4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms