Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv17A0A140T8P8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Gm6345-202ENSMUST00000180900 204 ntBASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Gm17808-201ENSMUST00000200859 894 ntBASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv17A0A140T8P8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Gm11950-201ENSMUST00000121615 838 ntBASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Gm10052-201ENSMUST00000168019 960 ntBASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Gm29518-201ENSMUST00000190858 372 ntBASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Gm7729-201ENSMUST00000050143 801 ntBASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv17A0A140T8P8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv17A0A140T8P8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms