Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm5587-201ENSMUST00000206270 674 ntBASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Gm23634-201ENSMUST00000175071 91 ntBASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Trav9n-2A0A0G2JDP3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms